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Big Data
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Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
NGS
R
statistics
genomics
big data
Job
5.4 years ago • updated 4.5 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
896
views
Job:
Data Manager - BC Cancer Research Center, Vancouver BC
computational
genomic
big data
bioinformatics
Job
5.0 years ago
jmaanaki
• 0
0
votes
0
replies
978
views
Job:
Postdoctoral positions in drug discovery and genome data science
computational biology
biostatistics
big data
data science
drug discovery
Job
5.3 years ago
Thomas Girke
★ 1.7k
1
vote
2
replies
971
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How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
perdedorium
• 0
1
vote
1
reply
1.1k
views
Subsetting Rle with ORF-sequence-positions by the 3 frames
Rle
Big data
coverageByTranscript
6.2 years ago • updated 6.1 years ago
hauken_heyken
▴ 80
0
votes
0
replies
1.3k
views
What is the recommended method for running WGCNA on large metatranscriptomic dataset?
wgcna
transcriptome
big data
metagenomics
gene expression
6.3 years ago
jol.espinoz
▴ 40
3
votes
1
reply
1.4k
views
AnnotationHub: confusing pValue/qValue for (some) Roadmap records
roadmap project
annotationhub
epigenomics
big data
updated 8.1 years ago by
Valerie Obenchain
★ 6.8k • written 8.1 years ago by
kevin.rue
▴ 350
0
votes
0
replies
2.1k
views
Job:
Postdoctoral Research Associate Position- Harvard Medical School (Probabilistic Algorithms and Software for Biomedical Big Data)
Probabilistic Algorithms
Big Data
Job
9.1 years ago
Doe, Aimee
▴ 40
8 results • Page
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Comment: gds in GEOmetadb 2023-06-26 version is empty
by
Frederico Moraes Ferreira
▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter
by
James W. MacDonald
66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat
by
Michael Love
42k
You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.
Comment: Most enriched pathway is not expressed when modifying universe parameter
by
adripel
• 0
In the enrichGO results we have significant and non-significant enriched terms that are displayed. So why would an enriched term (significa…
Answer: Design formula, numeric contrast, and lfcshrink in deseq2
by
Michael Love
42k
For questions about how to construct the correct contrasts correspond to particular hypotheses, I recommend consulting with a local statist…
Votes
Comment: Most enriched pathway is not expressed when modifying universe parameter
Time-course, comparison of two groups
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: GESA with certain gene list returns no result with human genom, but many result
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
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